Development of 11 polymorphic microsatellite markers for Xylocarpus granatum (Meliaceae) using next-generation sequencing technology

Publons ID6052037
Wos IDWOS:000326387800067
Doi10.1007/s12686-013-9990-9
TitleDevelopment of 11 polymorphic microsatellite markers for <i>Xylocarpus granatum</i> (Meliaceae) using next-generation sequencing technology
First AuthorTomizawa, Yuki; Shinmura, Yoshimi; Wee, Alison K. S.;
Last AuthorKajita, Tadashi
AuthorsTomizawa, Y; Shinmura, Y; Wee, AKS; Takayama, K; Asakawa, T; Yllano, OB; Salmo, SG; Ardli, ER; Tung, NX; Malekal, NB; Onrizal; Meenakshisundaram, SH; Sungkaew, S; Bin Saleh, MN; Adjie, B; Soe, KK; Oguri, E; Murakami, N; Watano, Y; Baba, S; Webb, EL; Kajita, T;
Publish DateDEC 2013
Journal NameCONSERVATION GENETICS RESOURCES
Citation2
AbstractHuman impacts have seriously damaged mangroves, and conservation of mangroves will require information on local and regional population genetic structures. Here, we report the development and polymorphism of eleven novel microsatellite markers, developed using next-generation sequencing on 56 samples of widespread mangrove species Xylocarpus granatum (Meliaceae) from nine populations across the Indo-West Pacific region. All loci were found to be polymorphic, with the number of alleles per locus ranging from four to 19. In a population from Sabah (Malaysia), the mean observed and expected heterozygosity per locus was 0.59 and 0.58, respectively. No null allele, significant linkage disequilibrium or deviation from Hardy-Weinberg equilibrium was detected among all loci. The eleven markers developed can be valuable tools to conservation genetics of this species across its distributional range.
Publish TypeJournal
Publish Year2013
Page Begin1159
Page End1162
Issn1877-7252
Eissn1877-7260
Urlhttps://www.webofscience.com/wos/woscc/full-record/WOS:000326387800067
AuthorDr.rer.nat. ERWIN RIYANTO ARDLI, M.Sc.
File19791.pdf